Effective Serratia marcescens Nuclease for DNA & RNA Removal: MaxNuclease™

Effective Serratia marcescens Nuclease for DNA & RNA Removal: MaxNuclease™

By Mallory Griffin

Nucleic acid removal is an essential step in biologics production workflows. Our MaxNuclease™ enzyme is a non-specific endonuclease from Serratia marcescens. This Benzonase® nuclease alternative offers a quality, cost-effective alternative for degrading both DNA and RNA in biological products. MaxNuclease™ provides comparable performance for nucleic acid digestion and is manufactured in our cGMP facility, making it suitable for commercial or preclinical biologics workflows.

Enzyme Characteristics

MaxNuclease™ is identified from Serratia marcescens and is a genetically engineered endonuclease expressed in E. coli (Escherichia coli). The endonuclease is manufactured in a cGMP facility with stringent quality release testing. MaxNuclease™ degrades all forms of nucleic acids including single- and double-stranded, linear and circular nucleic acids by hydrolyzing internal phosphodiester bonds between nucleotides to produce 5'-monophosphate oligonucleotides of 2-5 bases in length.

Quality Control Criteria

Assay

Specification

Activity (Dissolve herring sperm DNA)

≥ 250 U/µL

Purity (Bis-Tris)

≥ 95%

Purity (SEC-HPLC)

≥ 99%

Residual Protease

Negative

Residual Host Protein

≤ 10 ppm

Endotoxin

≤ 0.01 EU/kU

Sterility

Negative

Residual Heavy Metal

≤ 10 ppm

Mycoplasma

Negative

Product Performance Data

MaxNuclease™ exhibits comparable degradation activity to leading Serratia marcescens nuclease in host cell DNA removal and plasmid DNA removal. 

Host Cell DNA Removal

Virus harvest solution was treated with 25U/mL and 50U/mL endonuclease at 37°C for 2 hours, respectively. Detection of Host Cell DNA (HCD) residue was analyzed. MaxNuclease™ has higher degradation activity versus Competitor B demonstrated by lower HCD residue for both 25U/mL and 50U/mL working concentrations.

Figure 1. Virus harvest solution was treated with 25U/mL and 50U/mL endonuclease at 37°C for 2 hours, respectively. Detection of Host Cell DNA (HCD) residue was analyzed. MaxNuclease™ has higher degradation activity versus Competitor B demonstrated by lower HCD residue for both 25U/mL and 50U/mL working concentrations.

Plasmid DNA Removal

Virus harvest solution was treated with 25U/mL and 50U/mL endonuclease at 37°C for 2 hours, respectively. Detection of plasmid DNA (pDNA) residue was analyzed. MaxNuclease™ has higher degradation activity versus Competitor B demonstrated by lower pDNA residue for both 25U/mL and 50U/mL working concentrations.

Figure 2. Virus harvest solution was treated with 25U/mL and 50U/mL endonuclease at 37°C for 2 hours, respectively. Detection of plasmid DNA (pDNA) residue was analyzed. MaxNuclease™ has higher degradation activity versus Competitor B demonstrated by lower pDNA residue for both 25U/mL and 50U/mL working concentrations.

Degradation of PCR Product, Genomic DNA, and Plasmid DNA

MaxNuclease™ added to PCR product, genomic DNA, and plasmid DNA shows comparable degradation activity of nucleic acids to leading competitors.

Figure 3. MaxNuclease™ added to PCR product, genomic DNA, and plasmid DNA shows comparable degradation activity of nucleic acids to leading suppliers.

Applications

  • Biologics Workflows: Remove nucleic acids in industrial biological products such as vaccines, polysaccharides, and recombinant proteins, to meet regulatory requirements and improve product efficacy.

  • Viscosity Reduction: Reduce the viscosity of cell lysates and cell clumping, increasing protein yield, improving separation effect, making it easy to filter (especially ultrafiltration), and facilitate downstream chromatographic purification workflows. 

  • Viral Vector Production: Remove unwanted nucleic acids in gene therapy vector preparations, such as AAV and lentiviral vectors, to avoid aggregation in cell products and improve purification efficiency.

  • Viral Vaccine Production: Reduce host-derived nucleic acids and plasmid DNA during vaccine manufacturing, decreasing viscosity and preventing aggregate formation, to improve downstream processing. 

  • Sample Preparation: Improve resolution and recovery in biochemical analysis such as ELISA, chromatography, two-phase electrophoresis, and footprinting analysis, by degrading nucleic acids in samples.

Operating Conditions

MaxNuclease™ has the following optimal and effective reaction conditions: 

Condition

Optimal*

Effective**

Mg2+

1-2mM

1-10mM

Na+, K+

0-100mM

0-300mM

pH

8-10

4-10

Temperature

37℃

0-50℃

PO43-

0-10mM

0-80mM

 

*The condition under which MaxNuclease™ retains >90% of its activity

**The condition under which MaxNuclease™ retains >15% of its activity

Effect of Temperature

Effect of temperature on MaxNuclease™ activity. The relative activity rises with increasing temperature. The optimum temperature is 37°C-42°C.

Figure 4. Effect of temperature on MaxNuclease™ activity. The relative activity rises with increasing temperature. The optimum temperature is 37°C-42°C.

Effect of pH

Effect of pH on MaxNuclease™ endonuclease activity. The optimum pH is between 8 and 10.

Figure 5. Effect of pH on MaxNuclease™ endonuclease activity. The optimum pH is between 8 and 10.

Stability Testing

Stability of MaxNuclease™ at 37°C and 25°C. The relative activity is stable when stored at 37°C and 25°C for up to 7 days.

Figure 6. Stability of MaxNuclease™ at 37°C and 25°C. The relative activity is stable when stored at 37°C and 25°C for up to 7 days.

Freeze-thaw stability of MaxNuclease™. The relative activity is stable when MaxNuclease™ is freeze/thawed between -80°C to 4°C and -20°C to 25°C up to 12 times. 

Figure 7. Freeze-thaw stability of MaxNuclease™. The relative activity is stable when MaxNuclease™ is freeze/thawed between -80°C to 4°C and -20°C to 25°C up to 12 times. 

MaxNuclease™ ELISA Kit

After nucleic acid removal using MaxNuclease™, the residual enzyme in the product or sample must be evaluated. For residual MaxNuclease™ detection, KACTUS has developed a highly sensitive and specific sandwich ELISA quantification kit, with a sensitivity of up to 23 pg/mL.

Example Standard Curve

Example 8-point standard curve for MaxNuclease™ ELISA kit to quantify residual MaxNuclease™ enzyme. 

Figure 7. Example 8-point standard curve for MaxNuclease™ ELISA kit to quantify residual MaxNuclease™ enzyme. 

Affordable Endonuclease for Biologics Production Small and Large Scale

MaxNuclease™ is an active and reliable alternative to Benzonase® nuclease for nucleic acid removal in various biologics manufacturing processes. Its high efficiency, cost-effectiveness, and GMP-grade production make it a valuable nuclease for viral vaccine, viral vector, and recombinant protein production workflows. MaxNuclease™ is suitable for small and large-scale production and is available in a consistent, long-term supply. To learn more about MaxNuclease™, please contact us at support@kactusbio.us

Request a quote or test sample →

Products

MaxNuclease™, GMP-Grade

MaxNuclease™ ELISA Kit

Additional Resources

About MaxNuclease™

Product Brochure

 

Benzonase® is a registered trademark of Merck KGaA. MaxNuclease™ is a product of KactusBio Inc. 

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